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Todd M Lowe

Professor & Associate Dean for Research, Baskin Engineering

831-459-1511

tmjlowe@ucsc.edu

Pronouns he, him, his, his, himself

Division Baskin School of Engineering

Department/College/Unit Biomolecular Engineering

Title Professor & Associate Dean for Research, Baskin Engineering

Affiliation Faculty

Other UCSC Campus Affiliation Baskin School of Engineering
Biomolecular Engineering

Faculty Type Regular Faculty

Areas of Expertise Biology
Bioinformatics
Big Data
Genomics
RNA Biology
Molecular Biology
Microbiology
Gene Expression

Web Site

Lowe Lab Web Page
Genomic Transfer RNA Database
Archaeal Genome Browsers
Microbial Genome Browsers

Primary Office Location Physical Sciences Building
Room 320

Office Hours By Appointment

Mail Stop SOE2

Biography, Education and Training

B.A in Biology, 1992, Williams College, Williamstown MA
Ph.D. in Molecular Genetics, 1999, Washington Univ. in St. Louis

Research Interests

Computational and experimental non-coding RNA research
Comparative transcriptomics
RNA gene discovery (gene finders) and probabilistic modeling
RNA-based gene regulation (antisense small RNAs, RNA-guided modification)
Transfer RNA research - new functions and modes of regulation
Role of RNA modification in regulation
Alternative roles of non-coding RNAs (e.g., tRNA-derived small RNAs, piRNAs)
Genomics of Archaea
Evolutionary adaptation to extreme environments
Small nucleolar RNA research
Evolution of RNA gene familes

Selected Publications

Current Publications

Courses BME 110, Computational Biology Tools

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